Lung Modelling

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Lung Modelling is a python package that provides tools for running statistical shape analysis workflows on lung imaging datasets. The core statistical shape analysis functionality is provided by Shapeworks.

Full documentation can be found on Github Pages

Source code can be found on Github

Features

  • Command line app to run an automated statistical shape analysis workflow.

  • Configuration management powered by Hydra

  • Workflow logging for data provenance

  • Simple workflow orchestration tool WorkflowManager which provides an interface for adding new workflow tasks

  • Library of image/mesh preprocessing tools